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Disclaimer: I have a very minimal stats background and am just getting into this stuff. Corrections to any terminology I use or an improved rephrasing would be super appreciated.

I have a simple science/perception experiment that I've run, testing a single group of subjects on 2-dimensions of conditions: speed (3 possible values) and "encoding type" (3 possible values). On a given trial, a subject is presented with a stimulus of a random "encoding type" presented at a random speed. I have a small number of subjects (~10). For each subject, I've calculated their performance (an observation) for each speed+encoding type combination.

I'm interested in only seeing if there is a significant difference in performance of of "encoding type" restricted to a given speed (e.g. is encoding type 1 at speed 1 different from encoding type 2 at speed 1). I don't care of comparisons across speeds (e.g. I don't care if encoding type at speed 1 is different from encoding type 1 at speed 2). I'm doing 9 comparisons total (3 for each speed). So far, I've only run some paired ttests (would this even be the right thing to do?). I am getting some significant results without correction (p values ~0.03).

  • Is a paired ttest the best test to use?
  • Should I be correcting at all?
  • Is there something other than bonferroni/sidak I should try? I've attempted to use bonferroni correction, where I took 0.05/9 = 0.0055. This throws out a number of results. Should I be dividing by 9 (the total number of tests I've performed) or by 3, the total number of tests constrained to the speed condition?
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"The researcher armed with a confidence interval, but deprived of the false respectability of statistical significance, must work harder to convince himself and others of the importance of his findings. This can only be good." Michael Oakes – rolando2 Aug 23 '12 at 3:00

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