Hidden Markov Models are used for modelling systems that are assumed to be Markov processes with hidden (i.e. unobserved) states.
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time complexity and space complexity for HMM forward recursion
When Reading the HMM models, I found the following discussion on the time complexity and space complexity regarding forward recursion.
I am sort of confusing on the reason of getting O(K^2N) and ...
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19 views
gaussian mixture HMM
What is the difference of gaussian HMM and gaussian mixture HMM (the emission is gaussian or gaussian mixture)? I want to know if it is the same thing. What is the point when estimating the ...
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28 views
Hidden Markov model & statistical significance
I am using HMM to explore the language development of one individual with six variables as input, which are trained into three sequences.
In the first state, the covariance of variable A and B is ...
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13 views
Can Baum-Welch be used to train HMM model without observed sequence?
Can Baum-Welch be used to train HMM model without observed sequence? I want to use Baum-Welch to get the parameters and then use Viterbi to infer the hidden state sequence. Does it make sense?
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83 views
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1answer
84 views
HMM forward algorithm in MATLAB
Does anyone know where can I find a pseudo code or MATLAB code of the HMM forward algorithm?
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39 views
HMM initialization
I'm working on implementing HMM Forward Algorithm in Matlab. I am having some difficulty in coding the $\alpha_{j}(t)$
initialize $t <- ,$ $a_{ij}, b_{jk}$, visible sequence $V^T, \alpha_j(0)$
...
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49 views
Baum-welch algorithm: probabilities after each step
In an effort to understand machine learning, at least to some degree, I've been implementing the various algorithms to solve the three problems in a Hidden Markov Model. I've been using Rabiner's ...
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1answer
72 views
Two sequences, one HMM
I know how to fit a hidden markov model to a data sequence, using the matlab-implementation of the baum-welch algorithm.
But what should I do if I do not have one data sequence, but a bunch of them? ...
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36 views
Which level of abstraction is appropriate when designing a Hidden Markov Model?
Bear with me, it is all new to me.
I have measured a thing repeatedly over a period of time and I have clustered the results. (Clustered the measured values without the time information.) The ...
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1answer
80 views
Comparison between MDL and BIC
I'm currently studying Hidden Markov Models. There's a set of observations from which I need to determine the optimal number of states. After having found the maximum likelihood using Baum-Welch, I ...
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1answer
73 views
Training Hidden Markov Models for multiple input observations
I'm working with Hidden Markov Models and I have a dataset composed by independent phrases, where each word is an observation. Hence, the best way to adjust my parameters (via Baum-Welch algorithm) is ...
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1answer
49 views
How to generate the most common clickstream sequence
I have logs with the following information:
date-time username view action action_data
These logs are generated from a web-application which consists of several views where the users can perform a ...
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1answer
55 views
How to handle new observations on HMM decoding?
I'm implementing the HMM algorithms described in Rabiner's tutorial. But there is several issues to considered when we apply HMM for real problems. One of this problems is how to consider new ...
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64 views
Question about classification with hidden Markov models using depmixS4
I am using the depmixS4 package to fit HMMs.
I have three different classes of data and I have fitted 3 separate HMMs using the depmixS4 depmix and fit functions and given a new sequence of ...
7
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1answer
161 views
From standard HMM to Bayesian HMM
I'm trying to understand what the difference between a standard HMM and a Bayesian HMM is. Wikipedia just briefly mentions how the model looks like but I need a more detailed tutorial. Does someone ...
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24 views
Remove variance from temporal observations (input to HMM emission) by manipulating the individual observations
I have 52 weekly observations of count data that has some spikes and a definite trend (available here).
...
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1answer
83 views
Hidden Markov Model - Confusion
I don't know whether this is the correct forum for this but here goes:
I'm trying to implement a Hidden Markov Model to be able to predict and find the best sequence/path for a training file.
So ...
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61 views
Hidden Markov model library
I am looking for a free hidden markov model libraries in C/C++. I can google and get a list, but a it is impossible to tell which free ones are industry standard and well established. Can anyone ...
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35 views
CHMM using Bnet and MeteoLab
I have installed the toolkit of BNET and MeteoLab and I need someone who is familiar of them both to tell me which matlab file allows me to calculate the transition and emission probabilities of a ...
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1answer
94 views
Reshape Error when using Viterbi Algorithm [closed]
I am trying to use Viterbi algorithm (thanks to BNET) by the following code to train CHMM:
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1answer
106 views
Coupled hidden Markov model MATLAB error
I want to train CHMM using Matlab and I am new to use this software. I am using BNET CHMM which is this:
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2
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1answer
93 views
Coupled Hidden Markov Models
Does anyone know where can I find a pseudo code or Matlab Code for CHMMs please?
I am using categorical observations.
Thanks.
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66 views
Evaluate adequacy of hidden Markov models
I am trying to fit an HMM to a dataset resembling:
id0: A, A, A, C, B, A, C, B
id1: C, B, A, A, C, C
id2: B, A, A, C, B, B, A
In total there are three characters ...
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56 views
Hidden Markov Model: How to deal with multiple symbols emitted from a given state
I would like to build a HMM that would work similarly to a parts-of-speech tagger. But rather than tag words in a sentence with their part of speech, I would tag words in user searches on e-commerce ...
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24 views
Is there any way to define a distance metric given a Hidden Markov Model?
Let's say I've gotten a HMM that describes user search strings for my e-commerce website. Let's also say that I've just received a search string from a customer that doesn't have any search results. ...
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33 views
Calculate initial propabilities of Hidden Markov Chain
I was looking at this Wikipedia article and started to wonder if it's possible to calculate the start_probability vector given only the ...
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1answer
122 views
How to define initial probabilities for HMM?
HI This is first time I was reading about HMM, however I have read so many articles on web, but two things where I am confused are:
How to decide number of Hidden States (although HMM says we don't ...
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1answer
83 views
Confusion related to Kalman filters density view
I was reading this book related to Kalman filters and I didn't understand a couple of things. I have also attached the screenshot of the pages from the book where I had confusion.
The book is ...
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83 views
Confusion related to scaling factors in HMM
I was reading about HMM in C.M. Bishop's book Pattern Recognition and Machine Learning. I was going through the forward and backward algorithm using $\alpha$ & $\beta$
For forward messaging ...
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57 views
What are hidden Markov support vector machines?
What are hidden Markov support vector machines, and how do they compare/relate to HMMs and SVMs?
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64 views
How many parameters does a HM-SVM require?
How many parameters does a Hidden Markov Support Vector Machine require?
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0answers
112 views
Anomaly detection in user behaviour using hidden Markov models
I would like to detect user anomalies or mal-behavior on a web site. For each user I monitor the web browser used, IP (and thus ISP & geo-location) of the user as well as users' activities on the ...
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1answer
202 views
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1answer
125 views
Mathematics needed to understand Hidden Markov Models?
What are the mathematics that are necessary to understand Hidden Markov Models? Matrix Algebra? Linear algebra? Calculus? Bayesian statistcs?
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1answer
76 views
HMM a posteriori probs for hidden states and more
I have a two-state HMM and I am using Baum-Welch to estimate all the model parameters, including the Transition matrix. Then I use Viterbi to infer the optimal hidden state sequence.
I am using such ...
2
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1answer
109 views
Definition of dynamic Bayesian system, and its relation to HMM?
From Wikipedia
A Dynamic Bayesian Network (DBN) is a Bayesian Network which relates
variables to each other over adjacent time steps. This is often called
a Two-Timeslice BN because it says ...
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97 views
Building a probability distribution function from observation
There are N players and M objects, each of the objects has a value. Each player has a strategy in choosing an object. Each round a player will choose an object, many players can choose the same ...
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1answer
159 views
Viterbi training vs Baum-Welch algorithm
I'm trying to find the most probable path (i.e. sequence of states) on an HMM using the Viterbi algorithm. However, I don't know the transition and emission matrices, which I need to estimate from the ...
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57 views
Time dependant weights in hidden Markov models
I'm trying to modify a standard implementation of a continuous HMM with Gaussian Mixtures so that it internally gives more weight to newer observations in a time series.
Essentially, I'm trying to ...
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59 views
How to use Viterbi when there can be only one observation for a state
I want to calculate the best state sequence for a observation sequence. To do that, I want to use Viterbi algorithm.
In my problem, there are two properties:
There can be only one observation ...
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1answer
107 views
R packages or open source software for training Hidden Markov chains
Are there any well-designed R packages or other open-source software for training Hidden Markov chains?
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96 views
Learning hidden Markov model where transition/emission/initial probabilities aren't independent
I'm working on a problem that I've cast as an HMM, except that unlike the "traditional" case where the transition probabilities $a(i,j) = p(s_i = j \,|\, s_{i-1}=i)$, emission probabilities $b(j,o) = ...
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185 views
Forward and backward algorithm for HMM
I am looking for example based explanation for HMM's. How is that the HMM has P(O|HMM model) will have 2T* N^T (T is the length of observation, N is number of hidden states.)
And how this is solved ...
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47 views
Viterbi realignment
In the past I have trained Hidden Markov Models (HMMs) for sequence recognition with the Baum-Welch algorithm such that if there were $n$ classes, I would use training data $D_i$ for a class $i$ to ...
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58 views
Confusion related to hidden Markov model
I am referring to this tutorial: A Tutorial on Hidden Markov Models and Selected Applications in Speech Recognition. I am a bit confused about the forward algorithm.
From the tutorial:
If we ...
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1answer
96 views
How do I do multiscale HMM classification?
I'm using hidden Markov models to classify some accelerometer data. I take the Fourier transform of the raw data at a given window length, and then train an HMM for each class, and every test instance ...
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In a hidden Markov model, how do all observations and one state give you all states?
$Y^n$ are the observations of our HMM, where $Y_i=a_i$ is a single observation, where $a_i \epsilon \{0,1\}$. For example, $Y^n = k^n$ where $k^n=\{0,1,1,0\}$
$X^n$ are the actual states of our HMM, ...
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238 views
Hidden Markov models and anomaly detection
In Shane's answer to this question he suggests that Hidden Markov Models can be used more successfully than wavelets for anomaly / change detection (it was a bit unclear -the topic he was addressing ...
4
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1answer
183 views
Hidden Markov Model segmentation of different proportions of binary data
I need to segment a sequence of 0s and 1s by their proportion at relatively large scales. As an example, let's define 5 different states that represent 5 different ratios of 1s & 0s.
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