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2
votes
0answers
9 views

What are guidelines for SmartPLS boostrapping case size?

In SmartPLS, bootstrapping is used to generate the t statistic from which statistical significance can be judged. The two main bootstrapping parameters are case and sample size. Increasing the sample ...
5
votes
1answer
68 views

What's the best way to choose data for Crossvalidation on linear regression settings (PCA, PLS)

We are extracting features from EEG, which is a time dependent signal. We have signals of 10,000 datapoints over 64 channels, and we extract 10 features per timestamp per channel, so at the end we ...
0
votes
0answers
31 views

Predict missing value(s) using existing measurement's data

I have a few measurements (6) with 13 different features (so I have more parameters than measurements). Let's say I would have a new measurement with a few missing values, considering I have existing ...
0
votes
0answers
78 views

Understanding PLS output in R

I am running PLS regression in R using the 'pls' package. ...
-1
votes
0answers
84 views

Looking for example of multi-response PLS in R [closed]

Could anyone point me to an example of using R's PLS package to analyse data with multiple responses. I'm new to R and am having trouble setting up the data frame correctly. Specifically I'm ...
0
votes
0answers
96 views

Minimum sample size for PLS SEM

I have a structural model with 6 latent variables and 26 related items (indicators). The maximum number of indicators for a latent variable is 5. How should I calculate the minimum required sample ...
1
vote
1answer
43 views

How do you determine the effect of a simple predictor variable after a PLS analysis?

So, I am running PLS on a genetic dataset with phenotypic and genotypic information. I have about 1000 binary predictors (X), representing molecular markers, for each individual. My indicator ...
1
vote
0answers
67 views

How do you predict the value of new instance, when the training data were normalized?

I estimated a Partial Least Squares model where the X matrix had normalized columns. Now I want to predict the value for a new instance (which is a frequency vector summing to one.) I assume that if I ...
0
votes
0answers
112 views

Multilevel structure in Partial Least Squares Path Modelling [closed]

I have some complex survey data and need to fit a partial least squares path model (PLSPM) with the following structure M1, M2, M3, are latent variables from the item batteries Batt1, Batt2, Batt3. ...
2
votes
1answer
83 views

Under what conditions can a PLS regression model be expressed by single linear equation?

I am confused by two, yet inconsistent for me, facts: Since the PLS regression is expressed by matrices of scores and loadings as $$X=TP^T+E\\Y=UQ^T+F$$ how it can be translated into linear equation ...
-3
votes
3answers
181 views

Dimension reduction technique [closed]

As i know, PCA and PLS are two famous methods of dimension reduction Could you please name for other (neural network is it useful)?
1
vote
1answer
215 views

How to fit data with nonlinear partial least squares in R?

I am looking for a way to do nonlinear partial least squares in R or matlab. I thought kernel pls was a way to do it but it is not directly related to nonlinear pls. Do I have to calculate my own ...
4
votes
1answer
257 views

Combining principal component analysis and partial least squares

I know PCA and PLS are considered as alternative method to each other. But I am thinking about a kind of combination of the two in case of lots of predictors with little variability. In that case, ...
1
vote
1answer
185 views

how to find a linear combination of predictors maximizing correlation between its score and dependent variable in R

Please correct me if I am wrong as I am not good at R. I think I can find a linear combination maximizing correlation between predictors and dependent variables by running partial least squares ...
0
votes
0answers
84 views

PLS regression is not working on weighted data

I was running PLS regression on the data which is weighted and gives the following error message: ...
3
votes
1answer
2k views

PLS in R with the pls package

I am very new in PLS and I try to understand the output of the R function plsr(). Let us simulate data and run the PLS: ...
6
votes
1answer
483 views

PCA, LDA, CCA, and PLS

How are PCA, LDA, CCA, and PLS related? They all seem "spectral" and linear algebraic and very well understood (say 50+ years of theory built around them). They are used for very different things PCA: ...
5
votes
1answer
334 views

Measuring predictive accuracy for multiple dependent variables

In machine learning and in statistics there exist plenty of measures which estimate the performance of a predictive model. For example, classification accuracy, area under ROC curve ... for ...
4
votes
0answers
194 views

What, if any, dissimilarity is preserved in partial least squares (PLS)?

When we perform a principal components analysis (PCA) on a multivariate data set we are interested in finding orthogonal components that explain maximal variance in the data set. We can form a biplot ...
6
votes
2answers
998 views

How to compute the confidence intervals on regression coefficients in PLS?

The underlying model of PLS is that a given $n \times m$ matrix $X$ and $n$ vector $y$ are related by $$X = T P' + E,$$ $$y = T q' + f,$$ where $T$ is a latent $n \times k$ matrix, and $E, ...