Machine learning framework for Python.

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RandomForestClassifier Regression Probabilities [migrated]

Using sklearn's RandomForestClassifier, if the class is a float then it will predict with regression trees and the prediction will be a float. I am trying to use ...
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1answer
10 views

Recommendation Engine With Physical Distance Cutoff

I am looking to develop a recommendation engine for local stores to users. There are approximately 1 million stores in the database and around 1 million users. The 1Mx1M matrix for a user-based ...
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1answer
26 views

Plot that shows which attribute has the most effect on class?

I'm playing around with two datasets: Mushrooms and Breast Cancer. I'm trying to form a hypothesis of which attribute would have the most effect on the class when making predictions about the class. ...
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1answer
48 views

LogisticRegression - binary classification, “custom threshold”

I have a binary classification problem that I am trying to solve with sklearn's Logistic Regression. I am aware of the fact that the predict_proba() function is apparently only an approximation of the ...
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15 views

Decision function for BernoulliNB classifier. ( for use in plotting ROC and PR curves )

I would like to plot the PR curve using scikit-learn for the Bernoulli Naive Bayes estimator. However, attempting to do so give an error, ...
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27 views

Random Forest Probabilistic Prediction vs majority vote

Scikit learn seems to use probabilistic prediction instead of majority vote for the model aggregation technique without an explanation as to why (1.9.2.1. Random Forests). Is there a clear ...
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1answer
23 views

Tuning alpha parameter in LASSO linear model in scikitlearn

I'm using the LASSO method, in the problem of text classification (sentiment classification). The features I'm using are mainly Ngrams (every N consecutive words) and I'm using the LASSO specifically ...
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7 views

DecisionTreeClassifier scikit-learn : knowing the leaf to which an example belongs to

I am currently reading this paper http://quinonero.net/Publications/predicting-clicks-facebook.pdf , where they are using trees to generate feature that are afterwards fed to a linear classifier. My ...
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2answers
66 views

Output of Scikit SVM in multiclass classification always gives same label

I am currently using Scikit learn with the following code: ...
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7 views

Is there a way to get the p-values/standard errors via a function in scikit learn?

Can't seem to figure this out very easily. I am looking for a similar output as that of statsmodels; however, statsmodels doesn't support some of the regressions that I want to do. I basically want ...
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1answer
11 views

Why do two identical feature vectors (distance score 0) get different labels in DBSCAN?

I have two identical feature vectors. They have a distance score of 0. I perform DBSCAN Clustering (using sci-kit) and they get different labels. Is this expected behaviour?
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22 views

Regression Analysis with String values in column of DataFrame

I have a dataset which is having multiple columns where some column has string values with comma seperated ...
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1answer
16 views

Scikit-learn model representation

Suppose, i have some models created and fitted in scikit-learn. ...
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8 views

Grouping team features and comparing them to a single match outcome

I have two teams, and both teams have multiple features related to that team. For example: Players in the team. Players total points won. Team win percentage. Average player weight. Average player ...
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43 views

Random Forest Regressor - Incorporating Sample Weights in scikit-learn

I am running randomforestregressor in python. The target variable I am modeling is the frequency of an event occurring per unit of time. Each record in my data includes whether or not the event ...
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2answers
88 views

Predict interesting articles: increase accuracy

I'm trying to write a gui to display articles, and predict which articles I could like, based on the articles I previously liked. This post is the continuation of this one: ...
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29 views

How can I compare GBM feature importances to GBM partial dependence plots?

I am having trouble reconciling the difference between the indicated "importance" from a GBM that I am calculating with what is shown in the partial dependence plots. I would expect higher ...
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28 views

Factor Analysis in scikit learn: Many zero loadings

I am trying to apply Factor Analysis to a dataset with about 200 datapoints and 8 variables. When setting the n_components parameter to 8, I get a loading matrix with loadings for three factors that ...
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53 views

How to plot a precision-recall curve when doing cross-validation?

I'm using cross-validation to evaluate the performance of a classifier with scikit-learn and I want to plot the Precision-Recall curve. I found an example on ...
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43 views

Building a predictive model, regression with a long right tail

I am trying to build a, regressive, predictive model for a target time-series that is heavily skewed. You could think of the target as being like earthquake magnitudes or heavy rainfall. Most of the ...
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38 views

Which naive Bayes?

I am attempting to use a naïve Bayes classifier in python (using scikit-learn), with two examples. The first example has 6 classes and 2 hypotheses, the 2nd example has 2 classes and 6 hypotheses. ...
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37 views

Make a classification dataset with binary features using scikit-learn

I would like to illustrate a classification algorithm by using this algorithm on a 2-class dataset with binary n-dimensional features. In the past, I have used the scikit function make_classification ...
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1answer
102 views

How can you print the decision tree of a RandomForestClassifier

Recently, I have noticed that there is a method sklearn.tree.export_graphviz documented here. However, I do not know how I can apply it to a ...
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33 views

How do I get a classification report for my cross validated scores using sklean

I am running a logistic regression model using sklearn with 2 classes (1 and 0). Here is my code: ...
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32 views

How can I improve my sklearn logistic regression model

My objective is to classify sentences into useful (denote in boolean as 1) and not useful (denote in boolean as 0) categories. I have about 525 features where 300 features are the most frequent and ...
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1answer
156 views

scikit multi label classification

I am trying to classify data into four different labels. The training data looks something like: ...
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1answer
105 views

what does the numbers in the classification report of sklearn mean?

I have below an example i pulled from sklearn 's sklearn.metrics.classification_report documentation. What i dont understand is why there are f1-score, precision and recall values for each class ...
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1answer
32 views

Logistic-Regression: Prior correction at test time

Using sklean.linear_model.LogisticRegression for a binary classification problem. My classes are unbalanced. The positive class comprises about 20% of the training set. When fitting the model I use: ...
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37 views

How to scale data to train RBMs?

I know that when training Bernoulli Restricted Boltzmann Machines with real-valued data, then the input data should be scaled to the interval $[0,1]$ (last section from here). What I understood is ...
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1answer
91 views

Out-Of-Bag estimate in scikit-learn

I am using a bagging model from the Python Scikit-Learn module: ...
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138 views

More recognizable Python implementation of Linear Discriminant Analysis?

I have been using scikit-learn's LDA implementation to do some experiments, and recently wanted to test out some modifications to the LDA derivation. I was looking at the Python implementation that ...
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30 views

How do I filter insignificant modes from a kernel density estimation

How do I detect the number of significant modes in a set of data? I have a set of 1 dimensional data where the number of modes are unknown. I'm familiar with python and scikit learn so I use the ...
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15 views

Dealing with numbers-based categorial data in rf regression: to standardize, or encode?

I'm working with the SEER cancer dataset, and I'm trying to use regression to calculate the months a breast cancer patient can expect to survive given certain variables. Some of these variables are ...
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1answer
245 views

How to apply a Gaussian radial basis function kernel PCA to nonlinear data?

I have an assignment to implement a Gaussian radial basis function-kernel principal component analysis (RBF-kernel PCA) and have some challenges here. It would be great if someone could point me to ...
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1answer
33 views

Generating even-sized clusters in scikit-learn [duplicate]

I'm attempting to generate approximately even-sized clusters of a PCA'd feature set in Scikit-learn, but I'm not having any luck. I'm only familiar with KMeans clustering, and with that algorithm the ...
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95 views

Naive Bayes and text classification: which probability model and vectorizer combination makes sense?

I am wondering which combinations of Naive models can be paired with different vectorizing methods so that it makes sense. Let's say we have a simple binary spam-classification task. Multinomial ...
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1answer
99 views

Classification algorithms that return confidence?

Given a machine learning model built on top of scikit-learn, how can I classify new instances but then choose only those with the highest confidence? How do we define confidence in machine learning ...
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113 views

Why does the scikit-learn bootstrap function resample the test set?

When using bootstrapping for model evaluation, I always thought the out-of-bag samples were directly used as a test set. However, this appears not to be the case for the scikit-learn bootstrap ...
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16 views

How could I generate an “explanation” for each prediction in a classification ?

I have a classification problem. My classes are 0 and 1. The dataset is a bit big, the training is done on 7 million lines and 100 + variables so I choose to use scikit learn and the logistic ...
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44 views

why is adaboost predicting probabilities with so little standard deviation?

I'm using several algorithms to predict a binary target. So far I tried Gradient Boosting, Random Forest, Extra Random Trees and adaboost from scikit learn. All of these algorithms appear to predict ...
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1answer
115 views

How to get both MSE and R2 from a sklearn GridSearchCV?

I can use a GridSearchCV on a pipeline and specify scoring to either be 'MSE' or 'R2'. I can then access ...
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18 views

Joint label between two datasets produces significantly worse results

I have two sets of corresponding example labels with more or less the same features. Let's call first one label A and the second one label B. Both labels are binary. The classification accuracy of ...
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3answers
747 views

Why Python's scikit-learn LDA results are different from LDA in R or a step-by-step approach

I was using the Linear Discriminant Analysis (LDA) from the scikit-learn machine learning library (Python) for dimensionality reduction and was a little bit curious about the results. I am wondering ...
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1answer
168 views

Training a Tic Tac Toe brain - am I on the right track?

My only experience with Machine Learning is Andrew Ng's Coursera course, but I did work through that just fine and passed with 100%. I decided to practice by making up some problems and solving them. ...
3
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1answer
66 views

K-means metrics

I have read through the scikit learn documentation and Googled to no avail. I have 2000 data sets, clustered as the picture shows. Some of the clusters, as shown, are wrong, here the red cluster. I ...
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2answers
83 views

How to deal with a skewed class in binary classification having many features?

I am doing data analysis in the mobile ad targeting domain. I have around 18 features and for a combination of these features, the result is either True or False (1/0) depending on whether the ...
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24 views

Turning MiniBatchKMeans into Fuzzy MiniBatchKMeans

I'm using Scikit-Learn, which has an implementation of MiniBatchKMeans. I'm very inexperienced with ML, so I'm wondering how (if ...
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116 views

Running R caret in Python script [closed]

I am currently trying to transition from R into Python to streamline the process of working in web-based applications. I know that SciKit Learn has a ton of functionalities parallel to R's, including ...
2
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1answer
118 views

How to prepare interactions of categorical variables in scikit-learn?

What is the best way to prepare interactions of categorical features before fitting with scikit-learn? With statsmodels I could conveniently say in R-style ...
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76 views

How to prepare data for classifiaction

I have a relative small dataset that is consisted of numerical, nominal as well as text features. Some cells are empty whereas the class type is nominal and can take any of the ~10 different ...