Data organized into discrete categories or *classes* may present problems for certain analyses if the number of observations ($n$) belonging to each class is not constant across classes. Classes with unequal $n$ are *unbalanced*.

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Bias-Variance tradeoff for classifying unbalanced classes

i would like to use Bias-Variance trade-off to evaluate training set size in a classification problem. There are two classes which are not balanced (~70/30) and it seems that the common use of ...
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10 views

Nested ANOVA with 3 random effects and unbalanced design

I would like to run a nested ANOVA to test three random effects (secteur, loc nested in secteur, site nested in loc) on the variable A. The design is unbalanced so I used lmer instead of aov. However, ...
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1answer
15 views

Skewed Classification Problem

So I've read around and seen this is a problem. I have a classification problem and 12 variables ... I'm working on getting more, but even if l get the number to 20-30 I feel like the problem will ...
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1answer
30 views

problems in doing logistic regression with unbalanced sample, give me some references

I have a dataset with lots Y=0 and few Y=1. I have to run logistic regression, so I'm using a retrospective sample in order to get a more balanced sample. Could someone give me some references that ...
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24 views

Bias Correction for Large Scale Logistic Regression with Rare Events

I have a large dataset constituted of many ad impressions. My dependent binary variable clicked describe whether or not the ad was clicked on. As you can expect, the number of clicks is about 1000x ...
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1answer
27 views

Extreme unbalanced design: Group A: 43, Group B: 15,000

I've been asked to review a study comparing two groups, in which Group A=43 subjects and Group B=15,000 subjects. Intuitively, I feel that this is not a valid design, but can't find any specific ...
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27 views

Classification Algorithm For Small Sample Sizes

I am looking at a problem now where I need to train a classification algorithm. There are only 2 classes, lets call them A and B, and I want a value between zero and one indicating the probability ...
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37 views

Optimize Probability Thresholds for class imbalances in glmnet models in caret

In direct relation to the topic discussed here I intend to retrain the model in order to optimize the probability threshold for classification of both classes. Currently the model achieves high ...
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1answer
58 views

Choosing a good binary classifier to be trained by a small set of labeled data

I have a small set of labeled data (diagnosis in individual subjects): ~50 of "sick" observations ~100 of "healthy" observations In reality, only ~1% of the observations are expected to be ...
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1answer
45 views

What does it actually mean for classes to be balanced?

I saw the following statement when reading Kuhn's APM: "The classes are fairly balanced; there are 111 samples in the first class and 97 in the second..." I thought balance would require the ...
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1answer
51 views

How can I derive confidence intervals from the confusion matrix for a classifier?

I have am using k-fold cross validation to generate a confusion matrix for a classifier. I need to calculate 95% confidence intervals for the number of times each class is predicted when run against a ...
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29 views

unbalanced groups in mixed design ANOVA

I want to perform a mixed design ANOVA. Time is the within subjects factor and the between subjects factor is Borderline, which is a categorical variable (borderline yes or no). There are 30 people ...
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13 views

Non idependence within groups

I have to train a machine learning model for classifying two groups. Unfortunately, my positive group has a small number and many cases are not independent from each other (observations taken in ...
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21 views

Unbalanced groups and classification errors

I would like to adopt a general strategy for dealing with an very unbalanced dataset, where my "positive" group corresponds to 1/40 of all the observations. The reason why I ask it is because all the ...
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2answers
112 views

Finding occurrences of specific patterns in time series

I have to locate occurrences of Cyllinder, Bell and Funnel patterns in univariate time series $X$ of gamma-ray sensoring. This is a specific case of the general CBF synthetic problem found in a few ...
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1answer
111 views

Selection bias and reliability

I need a bit of help with interpretation of classification results. I have unbalanced data set (80% = 0 20% = 1), fitting classifiers (SVM, GradientBoosting or kNN) on such data does not yield good ...
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0answers
108 views

Best machine learning methtod for classificating datasets with non-independent cases within the groups

I have to perform binary classification of my data with supervised machine learning, but I have some difficulties working with my data set. It consists many genetic mutations that have parameters ...
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1answer
62 views

ROC curves for unbalanced datasets

Consider an input matrix $X$ and a binary output $y$. A common way to measure the performance of a classifier is to use ROC curves. In a ROC plot the diagonal is the result that would be obtained ...
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24 views

Non-parametric Levene's test by Nordstokke and Zumbo

The example they mention is using a one-way ANOVA. What if I have two factors (3x11) and a dependent variable, can I do a two-way ANOVA to calculate the univariate levene's test? If so, how would I ...
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3answers
456 views

Class imbalance in Supervised Machine Learning

This is a question in general, not specific to any method or data set. How do we deal with a class imbalance problem in Supervised Machine learning where the number of 0 is around 90% and number of 1 ...
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10 views

P-values for random effects when using REML [duplicate]

I'm using JMP to fit a model for an unbalanced split-plot design. Because it's unbalanced, I'm using REML rather than EMS. However, I would like to get test statistics/p-values for some of the random ...
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1answer
39 views

How to judge a partition is balanced or unbalanced?

Suppose we distributed $100$ coins to $10$ persons and the $i$-th person got ${x}_{i}$ coins, how to judge the distribution $X=\{{x}_{1}, {x}_{2}, ..., {x}_{n}\}$ (e.g., $X=\{5, 20, 15, 5, 10, 10, 10, ...
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2answers
52 views

Class Imbalance

What are the best practices for fitting a binomial classification model when the classes are very imbalanced? For example, 99.9% 1's and 0.1% 0's.
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1answer
61 views

Is up- or down-sampling imbalanced data actually that effective? Why?

I frequently hear up- or down-sampling of data discussed as a way of dealing with classification of imbalanced data. I understand that this could be useful if you're working with a binary (as opposed ...
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27 views

positive and negative sample count for ConvNets

I have been trying to set up a ConvNet to classify some data. This data should be classified to either 1 (being what I need to get from the image) and 0 for everything that is irrelevant. I have ...
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1answer
24 views

Affect of Misclassification Cost on SVM

I am using Matlab to train an SVM for very unbalanced data. However, my concern is not so much for the particular class assignment (ie 1/0), but rather to the scores (the prethreshold continuous SVM ...
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2answers
68 views

Balanced datasets in Naive Bayes

In a classification model, a desirable situation is to have classification classes evenly represented in the training dataset. Datasets that satisfy this property are called balanced datasets. ...
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1answer
63 views

multiclass classification and unbalanced dataset

I have a five-class SVM multiclass problem. The dataset is small (about 160 examples) and unbalanced i.e. I have classes with few examples. So far I further limited the dataset to 110 examples in ...
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1answer
87 views

Permutation on multiple Pairwise Comparison with least square means in R 3.1.2

I'm working on a study where I employed an analysis of covariance (Ancova) with unbalanced factors. I used permutation tests to obtain p-values for my estimates since my observation does not come from ...
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9 views

comparing probability of imbalance classes

I am trying to figure out what id the standard way to compare the probability of occurrence of two imbalances classes: let say there 1500 web pages with different languages edition (e.g. Wikipedia). ...
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46 views

cost matrix, unbalanced class, oversampling and threshold probability

Let's suppose I have a cost matrix with TP=+90 FP=-10 TN=0 and FN=-10, and that the class is unbalanced. I need to capture the costs in my decision. To do so, I always consider the probability ...
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1answer
92 views

Binary classification in imbalanced data

I have a binary classification problem where my data is highly imbalanced (80:20). Given this imbalance is present in both training and test set, does it make sense to apply specific strategies during ...
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0answers
44 views

SVM One-vs-One vs One-vs-ALL SVM

For an unbalanced dataset annotated by human annotators in which each item is assigned to different classes, what is the argument for and against using any of One-vs-One vs One-vs-ALL SVM ...
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2answers
135 views

Does Support Vector Machine handle imbalanced Dataset?

Does SVM handles imbalanced dataset? Is that any parameters (like C, or misclassification cost) handling the imbalanced dataset?
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1answer
282 views

Which post-hoc is more valid for multiple comparison of an unbalanced lmer-model: lsm or mcp?

After doing a model comparison with my mixed lmer model, I have a model with three main effects, no interaction, say ...
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1answer
61 views

LSmeans - Unbalanced data with interactions

I wish to analyze an unbalanced data set with 3 variables Tleaf, Tair, and orientation (factor with two levels). Considering the effect of the factor "orientation", I wish to determine if "Tair" has a ...
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123 views

Any advice on how to improve my accuracy rate in text classification?

I'm trying to do a text classification task. Here are some specs: Context file size = 1M+ documents already labeled Number of top-labels = 17 Number of sub-labels = around 130 Each document is ...
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47 views

dealing with imbalanced data set in multiclass text classification

I need to build a text classification model. I have a labeled training set and my goal is to classify the new unlabeled text . My training set is composed on 6 categories, that are imbalanced. The ...
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96 views

unary classification in PyBrain

I've just started using PyBrain for some data classification work, and I've gotten it working pretty well where I have data from all possible classes and I can train the network using all the classes. ...
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63 views

Unbalanced groups in a Hierarchical Linear Model

I would appreciate some practical and/or conceptual advice on sample sizes in a two level hierarchical linear model. A lot of the material on sample sizes and HLM is about the number of level 2 ...
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10 views

Multiclass target detection : N X (1 vs all) or 1 X (N vs all) ?

I am doing a multiclass classification using neural networks. say I have 10 target classes and one null (non-of-the-above-targets). is it better that I train a neural network separately for each ...
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2answers
71 views

If one group has 23 participants and the second group has 117 participants in it, can we rely on the result of t-test? [duplicate]

I was evaluating a research paper in which the authors have 23 male participants and 117 female participants. They have applied t-test to calculate Gender differences and have even concluded on ...
2
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1answer
131 views

Has anyone publicly shared an implementation of RUSBoost in R?

There's no package available on CRAN, so I was hoping someone in the community had written their own function/package. I see it's been done in MATLAB, so I may just have to start with that and write ...
2
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0answers
124 views

Average of predicted values with logistic regression

I have a large unbalanced dataset (the target has ~1500x more 0's than 1's) on which I train a logistic regression algorithm to predict the probability of success (Not a binary outcome but a real ...
2
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0answers
123 views

Unbalanced panel data: Fixed effects?

I have an unbalanced panel dataset with N=10 firms and T=61 days. Because one variable had values outside the theoretical range I had to constrain my dataset, which left me with only 239 observations. ...
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0answers
29 views

How to analyze data with unequal observations per cell?

I've got a very poorly designed study, and I need to find a way to analyze the data I've collected. Here's a description of the design: There are two within-subjects variables, one with four levels ...
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1answer
222 views

How to avoid random forest overfitting and improve prediction?

I have an input dataset x_train and an output dataset y_train ...
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3answers
80 views

Significant main effect in one-way, but not in two-way, MANOVA

I used a one-way MANOVA to study the effect of age groups on the average of height and weight and found that they were significant. Then I used a two-way MANOVA to study the effect of age groups and ...
2
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2answers
117 views

Which classifiers work well with unbalanced data?

I have a binary classification problem which is very unbalanced - it can have 98% of data from one class. Which classifiers work well with this sort of data? I have an unlimited supply of training ...
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27 views

Achieving high recall for smaller class in unbalanced linear svm

I have an svm-related question. I have an unbalanced dataset, meaning classA could be 1/10 to 1/35 of classB. Well I am interested in getting a linear svm which would separate the data and would ...