I see that this topic was closed few days ago, because it concerns specific context (data). No actually it does not. This is something that happens with any two variables that u have (at least 2) and want do manova on them.
If u try repeated measures design, it will give two parts of analysis: manova, and within subjects
the manova part of repeated measures output is not identical to that when run manova alone. Shouldn't they be the same?
To make it clear: when u have two variables: V1 measured at time1, and V2 measured at time 2 .. and suppose that they r measured on both males and females.
Now u may try RM design. It will show u Multivariate Results and Within Subjects Results.
Or u can try MANOVA analysis directly ...
My issue is. Why the result of the multivariate output in RM analysis isn't identical to that when run MANOVA alone?