As shown at the page 26 in http://www2.stat.duke.edu/~sayan/Sta613/2017/lec/nonlin.pdf.
$$
\Vert f \Vert_k^2 := \sum_i \frac{<f,\phi_i>_{L^2}^2}{\lambda_i}
$$
where $ \{(\lambda_i, \phi_i(\cdot))\}_{i=1,\cdots} $, ($\lambda_i > 0$), is the eigensystem of the integral operator with the kernel $T_k$
$$
[T_k(f)](\cdot) = \int k(\cdot,y)f(y)dy.
$$
Since $\{\phi_i(\cdot)\}_{i=1,\cdots}$ is an orthonormal basis of $L^2$,
an eigenfunction of $T_{k_T}$ can be represented as a linear combination of it
$$
\psi_n(\cdot) = \sum_i p_i^{(n)} \phi_i(\cdot)
$$
with the corresponding eigenvalue $\gamma_n > 0$.
Then
$$
[T_{k_T} \psi_n](\cdot) = \gamma_n \psi_n (\cdot)
$$
we have
$$
[T_{k_T} \psi_n](\cdot) = \int [k(\cdot, y) - k(\cdot, D)(k(D,D)+\sigma^2 I)^{-1}k(D, y)]\psi_n(y) dy
$$
where $k(\cdot, D) = k_T(\cdot)$ in the above question.
By substituting the linear combination above into the integral transform
$$
\int [k(\cdot, y) - k(\cdot, D)(k(D,D)+\sigma^2 I)^{-1}k(D, y)]\psi_n(y) dy \\
=\sum_i \lambda_n p_i^{(n)} \phi_i(\cdot) - k(\cdot, D)(k(D,D)+\sigma^2 I)^{-1} \sum_i \lambda_n p_i^{(n)} \phi_i(D)
$$
where I assume the interchangeability between integral and series, which needs to be checked for rigor but it usually behaves well in RKHS's sufficient regularities.
Taking $L^2$ inner product with $\phi_j(\cdot)$
$$
\lambda_n p_j^{(n)} - \lambda_n \phi_j(D)^T (k(D,D)+\sigma^2 I)^{-1} \sum_i \lambda_n p_i^{(n)} \phi_i(D)
$$
again, the interchangeability is assumed here.
From now on, I use infinite dimensional matrix&vector notation which essentially means linear operators&functions on a countable set.
Let
$$
\Lambda = diag(\lambda_1, \lambda_2, \cdots, ) \\
\mathbf{p}^{(n)} = [p_1^{(n)}, p_2^{(n)}, \cdots, ]^T \in \mathbf{R}^{\aleph_0} \\
\mathbf{\Phi} = [\phi_1(D), \phi_2(D), \cdots, ]^T \in \mathbf{R}^{\aleph_0 \times \vert D \vert}
$$
then the above equation can be grouped as
$$
\Lambda \mathbf{p}^{(n)} - \Lambda \mathbf{\Phi} (k(D,D)+\sigma^2 I)^{-1} \mathbf{\Phi}^T \Lambda \mathbf{p}^{(n)} = \gamma_n \mathbf{p}^{(n)}.
$$
Using Woodbury identity (in Wiki, it is mentioned that this identity holds in a general ring), we have
$$
(\Lambda^{-1} + \sigma^{-2} \mathbf{\Phi} \mathbf{\Phi}^T)^{-1} \mathbf{p}^{(n)} = \gamma_n \mathbf{p}^{(n)}.
$$
By letting
$$
\Gamma = diag(\gamma_1, \gamma_2, \cdots, ) \\
\mathbf{P} = [\mathbf{p}^{(1)}, \mathbf{p}^{(2)}, \cdots, ] \\
\mathbf{c} = [<f,\phi_1>_{L^2}, <f,\phi_2>_{L^2}, \cdots, ]^T
$$
then
$$
\Lambda^{-1} + \sigma^{-2} \mathbf{\Phi} \mathbf{\Phi}^T = \mathbf{P} \Gamma^{-1} \mathbf{P}^T
$$
and
$$
\Vert f \Vert_{k_T}^2 = \mathbf{c}^T \mathbf{P} \Gamma^{-1} \mathbf{P}^T \mathbf{c} = \mathbf{c}^T \Lambda^{-1} \mathbf{c} + \sigma^{-2} \mathbf{c}^T \mathbf{\Phi} \mathbf{\Phi}^T \mathbf{c} = \Vert f \Vert_k^2 + \sigma^{-2} \sum_{x \in D} f(x)^2.
$$
The last equality follows from the fact that $ \{ \phi_i \}_i $ are orthonormal basis in of $L^2$
$$
\mathbf{\Phi}^T \mathbf{c} = \sum_{i} <f, \phi_i>_{L_2} \phi_i (D) = f(D).
$$
I guess there should be a simpler proof than this.