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I am not a pro in genetics so please excuse my non-technical language.

I need dataset which contains the gene expression as well as the associated ATGC sequence with each gene expression value. For example if the gene expression for XYZ gene for a subject is 0.032, what is the ATCG sequence associated with it. What I expect is that sequence would be like ATCGAGATCGATATGCCATTAGCTATGC.....

So if I have 1000 genes and 10 subjects, I would expect a 1000x10 gene expression matrix and 10000 ATGC sequences in the dataset.

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Have you checked the GEO database? You'll find a plethora of datasets there, also combinations of gene expression data and sequence data.

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  • $\begingroup$ Thanks for the quick reply, but as I said, I am very new to this area. Could you please give me a specific example here. GEO confuses me. $\endgroup$ – Omar Rafique May 27 '19 at 7:47

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