How to best display crosstab data? I have a 10x10 matrix composed of two variables with 10 brands each. One variable is the brand purchased, the other is the brand considered. My matrix shows a crosstabulation between the two. I need an effective way to clearly visualize these data so that proximities suggest similarities between categories and distances dissimilarities.  I ran a correspondence analysis, but wasn't impressed with the graph. Are there any alternative technique to consider?
 A: I'm not certain of your exact data, or the process you're using to analyze it, but what you describe makes me think of a correlation matrix. In R, generating the matrix, as well as the corresponding heat map (with dendrogram) is easy. The example below used example data to show correlations between usage rates of different IT applications, and generates the image using the "plots" and "RColorBrewer" packages in R.
Note that you do not need to pass a correlation matrix to the following script example; you may pass cross-tab results directly, as any numbers in the matrix will be translated into the heatmap.
Sample data:
,Service Catalog, Incident Management, CMDB, Platform, Change Management, Knowledge, 
    Request Management
Service Catalog,100,95,92,88,85,80,65
Incident Management,95,100,90,79,86,83,50
CMDB,92,90,100,68,85,76,42
Platform,88,79,68,100,79,61,45
Change Management,85,86,85,79,100,58,85
Knowledge,80,83,76,61,58,100,45
Request Management,65,50,42,45,85,45,100

Sample code:
MyData <- subset(Example, select=c(Service.Catalog:Request.Management))

MyMatrix <- as.matrix(MyData)
MyScaled <- scale(MyMatrix)

library("plots")

install.packages("RColorBrewer")

png(filename="MyTest.png", width = 500, height = 500, res=72)

heatmap.2(MyMatrix, margins=c(20,20))

heatmap(MyMatrix, margins=c(15,15))
dev.off()


A: A two-way bar chart is often as effective as anything else. You have in effect a table of bars arranged in rows and columns. Length or height of bar encodes count or amount in cell, rather than colour of tile in a heat map. 
The same kind of display comes under many names, including aligned bar charts, multi-pane bar charts, survey plots, table lens, Bertin plots, Hinton plots, Willshaw plots, and no doubt others. 
A correspondence analysis can indicate good ordering of rows and columns; this problem is often called seriation. 
See for example  http://www.jstatsoft.org/v25/i03 
