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From Wikipedia:

a nuisance parameter is any parameter which is not of immediate interest but which must be accounted for in the analysis of those parameters which are of interest.

Suppose originally the parameters are all those of interest. If later nuisance parameters exist, I was wondering why nuisance parameters exist?

Nuisance parameter to make the model identifiable?

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2 Answers 2

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Nuisance parameters are typically introduced to account for extra variation in the model. Typically, the amount of variation in the data accounted for by your parameters of interest is compared to the amount of unaccounted for variation (Residual Error). By reducing the amount of unaccounted for variation, you become better able to detect effects of your parameters of interest.

As an example, the F-statistic is essentially the amount of variation explained by each of your parameters on average divided by the amount of variation a total junk parameter would explain by chance. This junk variation is derived by dividing the Residual Error by the unused degrees of freedom in the model. As you can see, by making the Residual Error smaller, you reduce the size of the denominator, which serves to increase the size of the F-statistic. This increases the chance that you will find an effect of your parameters of interest.

To generate a real-world example: I'm administering painful heat to people at different temperatures in the context of different treatments for pain-relief and I'm measuring how much pain people report feeling. In this case, I would want to include the temperature of my stimulations as a nuisance covariate when examining the effects of the analgesics. This isn't because I'm wondering if higher temperatures would lead to higher pain - I know they would. That's exactly why I would like to account for that variation when I'm trying to compare the effects of the different treatments, thus giving me a better chance of detecting differences due to treatment.

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  • $\begingroup$ Thanks! Do you mean that introducing nuisance parameter is to make the model identifiable? $\endgroup$
    – Tim
    Apr 28, 2013 at 2:42
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    $\begingroup$ It has nothing to do with identifiability. $\endgroup$
    – Peter Flom
    Apr 28, 2013 at 11:29
  • $\begingroup$ the example with temperature is adding a considered factor. nuisance covariates don't exist. do you mean confounding? nuisance parameters are not related to confounding. $\endgroup$
    – user318514
    Aug 5, 2022 at 3:07
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you can't introduce a nuisance parameter unless you forgot or lost your collected data for the non-hypothesis tested parameter given a model with two parameters or changed to a more parameters model and now have only partial knowledge of the parameters.

In a test of equal means for normals where unknown variances you have a nuisance parameter, the variances, because you don't know the variance.

If you move to a more parameters model, you have unknowns, uncertainty and estimate the unknowns A-Y to hypothesis test about Z.

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