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Jul 31, 2017 at 11:49 vote accept Mike
Jul 31, 2017 at 11:40 comment added Benoit Sanchez Yes. mkt's comment is accurate.
Jul 31, 2017 at 11:36 comment added Mike Just to clarify 100%, I should treat the variables that I measured (temperature, vegetation height, area of scrub etc) as fixed effects?
Jul 31, 2017 at 9:41 comment added Benoit Sanchez Yes I guess so. I think (in your study) the environment includes random and fixed effects. Fixed effects are what you measure, random effects are what is unknown about the population or the environment :for example individuals in the same population could have unknown genetic similarities that influence $Y$, or there could be something in the environment you're not aware of that influence $Y$ too.
Jul 30, 2017 at 23:17 comment added Mike Thanks for your answer Benoit. There is slightly more detail in my study that I didn't give in my question - this is a repeated measures study so I think refuge is then a random effect to account for this variation, correct? And do I consider the refuge as my "individual", since I'm counting the reptiles underneath each refuge each time, and my variables relate to each refuge directly?
Jul 30, 2017 at 21:23 history answered Benoit Sanchez CC BY-SA 3.0