In Theorem 1, which applies to a cross-sectional regression of averageaverage returns, the formula is $$(1+c)\Omega+\Sigma_{\bar{F}}^*$$ where $\Omega=A\Sigma A^\top$ is the asymptotic covariance matrix of $\lambda$ in the cross-sectional regression and $c=\lambda^\top\Sigma_F^{-1}\lambda$. $\Sigma_{\bar{F}}^*$, a (k+1)-by-(k+1)$(k+1)\times (k+1)$ matrix, is the bordered version of $\Sigma_F$ by augmenting the $k\times k$ matrix $\Sigma_F$ with a column and a row of zeros corresponding to the places of the intercept.
In Theorem 2, which applies to the Fama-MacBeth procedure with fixed beta estimated from the whole sample, the formula is $$(1+c)(\hat{W}-\Sigma_{\bar{F}}^*)+\Sigma_{\bar{F}}^*$$ where $\hat{W}$ is the asymptotic covariance matrix of $\lambda$ in the second step of the Fama-MacBeth procedure, i.e. $$\hat{W}=\frac{1}{T}\sum_{t=1}^T(\lambda_t-\bar{\lambda})(\lambda_t-\bar{\lambda})^\top$$ and and $c=\lambda^\top\Sigma_F^{-1}\lambda$.
First, on Page 16 of the Shanken (1992) paper, the author makes an example to correct the standard error from Chen, Roll, and Ross (1986) that use the Fama-MacBeth procedure. In the formula $$(1+0.36)[(0.0318)^2-0.0561/324]+0.0561/324$$, obviously $$(1+0.36)[(0.0318)^2-0.0561/324]+0.0561/324,$$ obviously we can see that the author uses the formula from Theorem 2.
Second, in a review paper, Goyal (2012) explicitly gives the formula for Shanken's (1992) correction applied to Fama-MacBeth regression in Eq. (33): $$T\cdot\mathrm{var}_{\mathrm{EIV}}(\hat{\lambda})=(1+c)[T\cdot\mathrm{var}(\hat{\lambda})-\Sigma_F]+\Sigma_F$$ $$T\cdot\mathrm{var}_{\mathrm{EIV}}(\hat{\lambda})=(1+c)[T\cdot\mathrm{var}(\hat{\lambda})-\Sigma_F]+\Sigma_F.$$
Finally, many people refer to Cochrane (2005). Actually if you read it carefully, the formula in Eq. (12.19) on Pagepage 240 for Shanken's correction is applied to the cross-sectional regression, as in Theorem 1. On Pagepage 249 when the author talks about the Fama-MacBeth procedure, he writes
If one is going to use them, it is a good idea to at at least calculate the Shanken correction factors outlined above, and check that that the corrections are not large.
However, no formula is provided here for the Fama-MacBeth regression. So I would rather trust the formula in Goyal (2012) for this case.