Your effect sizes for your pairwise contrasts would be derived from the test that is associated with the effect. For example, if you are doing a pairwise t-test comparing cells of your design, then your effect sizes would be derived from each of those pairwise t-tests (using whatever error term you select for those pairwise testse). As a pairwise t-test is computational equivalent to a one-sample t-test you should be able to calculate the Cohen's d using the formula $\bar{d}\over{s_{d}}$ (although this is what is commonly considered Cohen's d, I understand that Cohen's formulas actually reflected the use of $\sigma$)... Hedge's g is probably the preferred quantity anyway.

Your effect sizes for your pairwise contrasts would be derived from the test that is associated with the effect. For example, if you are doing a pairwise t-test comparing cells of your design, then your effect sizes would be derived from each of those pairwise t-tests (using whatever error term you select for those pairwise tests). As a pairwise t-test is computationally equivalent to a one-sample t-test, you should be able to calculate the Cohen's d using the formula $\bar{d}\over{s_{d}}$ (although this is what is commonly considered Cohen's d, I understand that Cohen's formulas actually reflected the use of $\sigma$).