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Use this tag for any *on-topic* question that (a) involves `R` either as a critical part of the question or expected answer, & (b) is not *just* about how to use `R`.

3 votes
1 answer
2k views

Interpretation of R2 from PERMANOVA (adonis2) in vegan package

I am unclear on how the R2 output from adonis2 is interpreted. Is it that a particular factor "explains" the differences in community composition? And thus, would R2 be interpreted as typically is in …
ecology's user avatar
  • 163
0 votes

Multiple R-squared from bootstrap in R

library(MuMin) mod1_boot <- Boot(mod1, R=1000, f=MuMIn::r.squaredGLMM, method="case") Confint (mod1_boot) …
ecology's user avatar
  • 163
1 vote
0 answers
59 views

Assessing results from package:IML FeatureImportance function output in R

I am using the iml package in R to assess the importance of individual variables from a generalized additive model through the featureimportance function (my understanding is that this is something that …
ecology's user avatar
  • 163
2 votes
1 answer
779 views

What method does varImp.gam use in caret package in R?

I see that the caret package has support for gam objects for the varImp function. I was wondering if there was documentation about which method the function uses when gam is the input?
ecology's user avatar
  • 163