1
$\begingroup$

To revive a past question and establish a definitive answer, how should the mean/mode and error intervals of log-transformed data be handled when applying Gaussian process regression?

For example, I obtain some original data, $Z$, from an experiment. Now suppose that $Z = exp(Y)$, where $Y \sim N(\mu,\sigma^2)$. Therefore $Z$ follows a log-normal distribution. It now appears natural to apply Gaussian process regression on $Y = ln(Z)$, which allows me to predict a future point $Y^*$, where $Y^*\sim N(\mu^*,\sigma^{*2})$.

But what is the appropriate method to convert $Y^*$ back into my original space, $Z^*$? For example, the 95% confidence interval in $Y$-space would be $[\mu^* - 1.96\sigma^*,\mu^* + 1.96\sigma^*]$. Is it appropriate to simply use a prediction interval of $[e^{\mu^* - 1.96\sigma^*},e^{\mu^* + 1.96\sigma^*}]$ when converting back into my original space? Are there established or recommended techniques when performing this back-transformation?

$\endgroup$
  • 1
    $\begingroup$ Your GP should give you posterior credible intervals on the transformed scale. It is natural to apply the inverse transform, as you've noted, to the posterior credible intervals to obtain credible intervals on the natural scale. This is done in stats pretty frequently (see the variety of binomial confidence intervals). $\endgroup$ – Demetri Pananos Apr 9 at 3:13
  • $\begingroup$ Interesting, is it "valid" then to describe this interval in the original scale as a 95% confidence interval if it is in the transformed scale? Are there possible pitfalls when using this approach (e.g. evaluation of errors on the original data, confidence interval on the median as opposed to the mean)? $\endgroup$ – Mathews24 Apr 9 at 14:16
  • $\begingroup$ Yes, it is valud to describe the interval as a confidence interval. But in GP, since you are computing posteriors, they are credible intervals, not confidence intervals. $\endgroup$ – Demetri Pananos Apr 9 at 14:18

Your Answer

By clicking “Post Your Answer”, you agree to our terms of service, privacy policy and cookie policy

Browse other questions tagged or ask your own question.