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Hierarchical cluster analysis is a method of cluster analysis which builds, by steps, a hierarchy of clusters, a dendrogram. Most popular is agglomerative hierarchical clustering (HAC) which starts from individual objects and collects them into bigger and bigger clusters.
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Why are the cluster analysis results using raw data the same as the ones using PCA scores?
This is because PCA scores are simply original data in a rotated coordinate frame.
Below on the left I show some example 2D data (100 points in 2D) and on the right the corresponding PCA scores. The …