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I have three study arms on interventions A, B, and C, which are independent of each other. The primary outcome is categorical (positive or negative). The null hypothesis is A = B = C.

From prior studies, the likely proportion of subjects with positive outcomes in arms A, B, and C are 0.8, 0.7, and 0.6, respectively.

What is the sample size needed to prove that the null hypothesis is wrong, assuming a power of 0.8 and alpha of 0.05?

PS: I am able to calculate the sample size using GPower (chi-square tests) with effect size (w) and df (2). However, is there any way to calculate the sample size directly using the above proportions rather than the effect size (w)?

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Statistical testing never proves that a hypothesis is wrong. In the frequentist (classical) statistics world you bring evidence against the supposition that the null hypothesis is right. Also, never use the observed results from a previous study in doing a power calculation. Power should be computed from the minimal effects you would be embarrassed to miss. And a power of 0.8 is suggesting that you care about noise 4x as much as you care about signal ($\alpha=0.05, \beta=0.2$).

A binary outcome has minimum information and will require very large sample sizes. A sample size necessary to estimate one proportion is 96 with a $\pm 0.1$ margin of error. To estimate a difference of proportions with this (somewhat large) margin of error requires $4 \times$ that sample size.

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  • $\begingroup$ I have seen your amazing website and was looking for some details of these heuristics were calculated but I didn't find it (yet). If you can provide any references I would be obliged. $\endgroup$ Commented Dec 29, 2023 at 15:57
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    $\begingroup$ See hbiostat.org/bbr chapter on comparing proportions $\endgroup$ Commented Dec 29, 2023 at 17:36

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